Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sdc4O35988 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc4O35988 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.86■□□□□ 0.93
Sdc4O35988 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Sdc4O35988 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc4O35988 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc4O35988 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.85■□□□□ 0.93
Sdc4O35988 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc4O35988 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Sdc4O35988 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc4O35988 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sdc4O35988 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc4O35988 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc4O35988 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sdc4O35988 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sdc4O35988 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sdc4O35988 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.84■□□□□ 0.93
Sdc4O35988 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.84■□□□□ 0.93
Sdc4O35988 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sdc4O35988 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc4O35988 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc4O35988 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc4O35988 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc4O35988 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc4O35988 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc4O35988 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc4O35988 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
Sdc4O35988 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sdc4O35988 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sdc4O35988 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc4O35988 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.82■□□□□ 0.92
Sdc4O35988 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc4O35988 Gm43017-201ENSMUST00000198296 752 ntBASIC20.82■□□□□ 0.92
Sdc4O35988 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Sdc4O35988 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc4O35988 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc4O35988 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc4O35988 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Sdc4O35988 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sdc4O35988 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sdc4O35988 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc4O35988 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc4O35988 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sdc4O35988 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.81■□□□□ 0.92
Sdc4O35988 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.81■□□□□ 0.92
Sdc4O35988 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc4O35988 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc4O35988 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc4O35988 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Sdc4O35988 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.8■□□□□ 0.92
Sdc4O35988 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc4O35988 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc4O35988 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sdc4O35988 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc4O35988 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc4O35988 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc4O35988 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Sdc4O35988 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.79■□□□□ 0.92
Sdc4O35988 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.79■□□□□ 0.92
Sdc4O35988 Spcs1-204ENSMUST00000226782 949 ntBASIC20.79■□□□□ 0.92
Sdc4O35988 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.79■□□□□ 0.92
Sdc4O35988 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sdc4O35988 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc4O35988 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sdc4O35988 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Sdc4O35988 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc4O35988 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc4O35988 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc4O35988 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sdc4O35988 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sdc4O35988 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc4O35988 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms