Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm2O35900 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.06■□□□□ 0.48
Lsm2O35900 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lsm2O35900 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lsm2O35900 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.05■□□□□ 0.48
Lsm2O35900 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lsm2O35900 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm2O35900 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.05■□□□□ 0.48
Lsm2O35900 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lsm2O35900 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm2O35900 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.04■□□□□ 0.48
Lsm2O35900 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm2O35900 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lsm2O35900 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lsm2O35900 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lsm2O35900 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.03■□□□□ 0.48
Lsm2O35900 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm2O35900 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm2O35900 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Lsm2O35900 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm2O35900 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm2O35900 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm2O35900 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm2O35900 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.02■□□□□ 0.48
Lsm2O35900 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm2O35900 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm2O35900 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lsm2O35900 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm2O35900 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.01■□□□□ 0.47
Lsm2O35900 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.01■□□□□ 0.47
Lsm2O35900 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm2O35900 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Lsm2O35900 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm2O35900 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.99■□□□□ 0.47
Lsm2O35900 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Lsm2O35900 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm2O35900 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.99■□□□□ 0.47
Lsm2O35900 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lsm2O35900 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.98■□□□□ 0.47
Lsm2O35900 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm2O35900 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.98■□□□□ 0.47
Lsm2O35900 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.98■□□□□ 0.47
Lsm2O35900 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Lsm2O35900 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm2O35900 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lsm2O35900 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm2O35900 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm2O35900 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm2O35900 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lsm2O35900 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Lsm2O35900 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.97■□□□□ 0.47
Lsm2O35900 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm2O35900 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm2O35900 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm2O35900 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm2O35900 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms