Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1i3O35627 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nr1i3O35627 Gm40881-201ENSMUST00000223397 166 ntBASIC21.81■■□□□ 1.08
Nr1i3O35627 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1i3O35627 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1i3O35627 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1i3O35627 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Nr1i3O35627 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Nr1i3O35627 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nr1i3O35627 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1i3O35627 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1i3O35627 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Nr1i3O35627 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1i3O35627 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1i3O35627 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Nr1i3O35627 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1i3O35627 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1i3O35627 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1i3O35627 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1i3O35627 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Nr1i3O35627 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.79■■□□□ 1.08
Nr1i3O35627 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Nr1i3O35627 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.79■■□□□ 1.08
Nr1i3O35627 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1i3O35627 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1i3O35627 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Nr1i3O35627 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1i3O35627 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.77■■□□□ 1.08
Nr1i3O35627 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.77■■□□□ 1.08
Nr1i3O35627 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.77■■□□□ 1.08
Nr1i3O35627 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Nr1i3O35627 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1i3O35627 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nr1i3O35627 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Nr1i3O35627 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nr1i3O35627 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Nr1i3O35627 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Nr1i3O35627 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.76■■□□□ 1.07
Nr1i3O35627 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1i3O35627 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.75■■□□□ 1.07
Nr1i3O35627 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1i3O35627 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1i3O35627 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1i3O35627 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Nr1i3O35627 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1i3O35627 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1i3O35627 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1i3O35627 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1i3O35627 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1i3O35627 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1i3O35627 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1i3O35627 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1i3O35627 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1i3O35627 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.72■■□□□ 1.07
Nr1i3O35627 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1i3O35627 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1i3O35627 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.71■■□□□ 1.07
Nr1i3O35627 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1i3O35627 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1i3O35627 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1i3O35627 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Nr1i3O35627 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Nr1i3O35627 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nr1i3O35627 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nr1i3O35627 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1i3O35627 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.7■■□□□ 1.06
Nr1i3O35627 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1i3O35627 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1i3O35627 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1i3O35627 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
Nr1i3O35627 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.69■■□□□ 1.06
Nr1i3O35627 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms