Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Clcn6O35454 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.13■□□□□ 0.97
Clcn6O35454 Gm13238-201ENSMUST00000117655 780 ntBASIC21.13■□□□□ 0.97
Clcn6O35454 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC21.13■□□□□ 0.97
Clcn6O35454 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn6O35454 Gm45444-201ENSMUST00000211394 898 ntBASIC21.13■□□□□ 0.97
Clcn6O35454 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn6O35454 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn6O35454 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Gm19087-201ENSMUST00000191430 946 ntBASIC21.12■□□□□ 0.97
Clcn6O35454 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn6O35454 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Clcn6O35454 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Gm12106-201ENSMUST00000116006 1200 ntBASIC21.11■□□□□ 0.97
Clcn6O35454 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clcn6O35454 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn6O35454 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn6O35454 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn6O35454 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.1■□□□□ 0.97
Clcn6O35454 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clcn6O35454 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn6O35454 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Clcn6O35454 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn6O35454 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.09■□□□□ 0.97
Clcn6O35454 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.09■□□□□ 0.97
Clcn6O35454 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.09■□□□□ 0.97
Clcn6O35454 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.09■□□□□ 0.97
Clcn6O35454 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn6O35454 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.08■□□□□ 0.97
Clcn6O35454 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn6O35454 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.08■□□□□ 0.97
Clcn6O35454 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Clcn6O35454 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn6O35454 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn6O35454 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn6O35454 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn6O35454 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn6O35454 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn6O35454 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn6O35454 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Clcn6O35454 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn6O35454 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Clcn6O35454 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Clcn6O35454 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Clcn6O35454 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn6O35454 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn6O35454 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC21.07■□□□□ 0.96
Clcn6O35454 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn6O35454 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Clcn6O35454 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clcn6O35454 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Gm15626-201ENSMUST00000117478 868 ntBASIC21.06■□□□□ 0.96
Clcn6O35454 Gm15546-201ENSMUST00000122095 826 ntBASIC21.06■□□□□ 0.96
Clcn6O35454 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.06■□□□□ 0.96
Clcn6O35454 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn6O35454 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn6O35454 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn6O35454 Gm43566-201ENSMUST00000196851 808 ntBASIC21.05■□□□□ 0.96
Clcn6O35454 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn6O35454 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn6O35454 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn6O35454 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clcn6O35454 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn6O35454 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms