Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cx3cl1O35188 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cx3cl1O35188 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cx3cl1O35188 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cx3cl1O35188 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cx3cl1O35188 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cx3cl1O35188 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.93■□□□□ 0.62
Cx3cl1O35188 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cx3cl1O35188 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cx3cl1O35188 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cx3cl1O35188 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.92■□□□□ 0.62
Cx3cl1O35188 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cx3cl1O35188 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cx3cl1O35188 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.91■□□□□ 0.62
Cx3cl1O35188 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cx3cl1O35188 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cx3cl1O35188 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.91■□□□□ 0.62
Cx3cl1O35188 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cx3cl1O35188 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cx3cl1O35188 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cx3cl1O35188 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Cx3cl1O35188 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cx3cl1O35188 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.9■□□□□ 0.62
Cx3cl1O35188 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cx3cl1O35188 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Gm21956-201ENSMUST00000179946 522 ntBASIC18.88■□□□□ 0.61
Cx3cl1O35188 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cx3cl1O35188 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.88■□□□□ 0.61
Cx3cl1O35188 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cl1O35188 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Gm43530-201ENSMUST00000195920 274 ntBASIC18.87■□□□□ 0.61
Cx3cl1O35188 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cl1O35188 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cl1O35188 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.85■□□□□ 0.61
Cx3cl1O35188 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.85■□□□□ 0.61
Cx3cl1O35188 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cl1O35188 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cx3cl1O35188 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cx3cl1O35188 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cx3cl1O35188 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cx3cl1O35188 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cx3cl1O35188 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.83■□□□□ 0.61
Cx3cl1O35188 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cx3cl1O35188 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cx3cl1O35188 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cx3cl1O35188 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cl1O35188 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.83■□□□□ 0.6
Cx3cl1O35188 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cl1O35188 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cl1O35188 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cl1O35188 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cx3cl1O35188 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms