Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufb11O09111 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ndufb11O09111 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufb11O09111 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufb11O09111 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufb11O09111 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ndufb11O09111 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.24■□□□□ 0.19
Ndufb11O09111 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.24■□□□□ 0.19
Ndufb11O09111 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufb11O09111 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufb11O09111 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufb11O09111 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ndufb11O09111 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.22■□□□□ 0.19
Ndufb11O09111 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ndufb11O09111 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.22■□□□□ 0.19
Ndufb11O09111 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndufb11O09111 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndufb11O09111 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufb11O09111 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufb11O09111 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufb11O09111 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufb11O09111 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufb11O09111 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ndufb11O09111 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufb11O09111 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndufb11O09111 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ndufb11O09111 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndufb11O09111 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndufb11O09111 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufb11O09111 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufb11O09111 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufb11O09111 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufb11O09111 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufb11O09111 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.2■□□□□ 0.18
Ndufb11O09111 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufb11O09111 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ndufb11O09111 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ndufb11O09111 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ndufb11O09111 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.19■□□□□ 0.18
Ndufb11O09111 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufb11O09111 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufb11O09111 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufb11O09111 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufb11O09111 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ndufb11O09111 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufb11O09111 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.19■□□□□ 0.18
Ndufb11O09111 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufb11O09111 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ndufb11O09111 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufb11O09111 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.17■□□□□ 0.18
Ndufb11O09111 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.17■□□□□ 0.18
Ndufb11O09111 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Ndufb11O09111 Gm24970-201ENSMUST00000175582 82 ntBASIC16.17■□□□□ 0.18
Ndufb11O09111 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ndufb11O09111 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ndufb11O09111 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ndufb11O09111 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ndufb11O09111 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufb11O09111 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms