Protein–RNA interactions for Protein: J3QPE5

Gm5849, Predicted gene 5849, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5849J3QPE5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Gm5849J3QPE5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5849J3QPE5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5849J3QPE5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5849J3QPE5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Gm9397-201ENSMUST00000200125 605 ntBASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Golph3-205ENSMUST00000228671 2842 ntBASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm5849J3QPE5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5849J3QPE5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.78■□□□□ 0.28
Gm5849J3QPE5 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.77■□□□□ 0.28
Gm5849J3QPE5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5849J3QPE5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm5849J3QPE5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms