Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Mir6236-201ENSMUST00000184437 123 ntBASIC21.38■■□□□ 1.01
Gm11236J3QMS7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm11236J3QMS7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.33■■□□□ 1
Gm11236J3QMS7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Gm42642-201ENSMUST00000200683 355 ntBASIC21.32■■□□□ 1
Gm11236J3QMS7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm11236J3QMS7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.31■■□□□ 1
Gm11236J3QMS7 Gm7291-201ENSMUST00000199147 382 ntBASIC21.31■■□□□ 1
Gm11236J3QMS7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm11236J3QMS7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Gm11236J3QMS7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Gm10849-201ENSMUST00000100397 618 ntBASIC21.3■■□□□ 1
Gm11236J3QMS7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.3■■□□□ 1
Gm11236J3QMS7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm11236J3QMS7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Gm11421-201ENSMUST00000122124 294 ntBASIC21.29■■□□□ 1
Gm11236J3QMS7 Gm26571-201ENSMUST00000181399 666 ntBASIC21.29■■□□□ 1
Gm11236J3QMS7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm11236J3QMS7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Gm27405-201ENSMUST00000184201 112 ntBASIC21.28■■□□□ 1
Gm11236J3QMS7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.28■■□□□ 1
Gm11236J3QMS7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.27■■□□□ 1
Gm11236J3QMS7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.27■■□□□ 1
Gm11236J3QMS7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Gm11236J3QMS7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm11236J3QMS7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms