Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn20G5E8X0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn20G5E8X0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn20G5E8X0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn20G5E8X0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cldn20G5E8X0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn20G5E8X0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn20G5E8X0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Cldn20G5E8X0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn20G5E8X0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn20G5E8X0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn20G5E8X0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn20G5E8X0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn20G5E8X0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn20G5E8X0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn20G5E8X0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn20G5E8X0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn20G5E8X0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn20G5E8X0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn20G5E8X0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn20G5E8X0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn20G5E8X0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Gm5921-201ENSMUST00000075898 882 ntBASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cldn20G5E8X0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn20G5E8X0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn20G5E8X0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.46■□□□□ 0.38
Cldn20G5E8X0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn20G5E8X0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn20G5E8X0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.45■□□□□ 0.38
Cldn20G5E8X0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.45■□□□□ 0.38
Cldn20G5E8X0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn20G5E8X0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn20G5E8X0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms