Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raph1F2Z3U3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Raph1F2Z3U3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raph1F2Z3U3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Raph1F2Z3U3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raph1F2Z3U3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raph1F2Z3U3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raph1F2Z3U3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.02■□□□□ 0.8
Raph1F2Z3U3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Raph1F2Z3U3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.02■□□□□ 0.8
Raph1F2Z3U3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.02■□□□□ 0.8
Raph1F2Z3U3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Raph1F2Z3U3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.02■□□□□ 0.79
Raph1F2Z3U3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Raph1F2Z3U3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Raph1F2Z3U3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Gm27502-201ENSMUST00000183495 199 ntBASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raph1F2Z3U3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
Raph1F2Z3U3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Raph1F2Z3U3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Raph1F2Z3U3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raph1F2Z3U3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.96■□□□□ 0.79
Raph1F2Z3U3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Raph1F2Z3U3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Raph1F2Z3U3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Raph1F2Z3U3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raph1F2Z3U3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raph1F2Z3U3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms