Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 Reep4-203ENSMUST00000226563 1444 ntBASIC31.8■■■□□ 2.68
BC005561E9Q5E2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
BC005561E9Q5E2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC31.8■■■□□ 2.68
BC005561E9Q5E2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
BC005561E9Q5E2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC31.8■■■□□ 2.68
BC005561E9Q5E2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
BC005561E9Q5E2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC31.79■■■□□ 2.68
BC005561E9Q5E2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
BC005561E9Q5E2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
BC005561E9Q5E2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
BC005561E9Q5E2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
BC005561E9Q5E2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
BC005561E9Q5E2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
BC005561E9Q5E2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
BC005561E9Q5E2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
BC005561E9Q5E2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC31.76■■■□□ 2.67
BC005561E9Q5E2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
BC005561E9Q5E2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC31.75■■■□□ 2.67
BC005561E9Q5E2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
BC005561E9Q5E2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
BC005561E9Q5E2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Gm10252-201ENSMUST00000209541 832 ntBASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Gm9988-201ENSMUST00000069786 435 ntBASIC31.73■■■□□ 2.67
BC005561E9Q5E2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC31.72■■■□□ 2.67
BC005561E9Q5E2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Gm4968-201ENSMUST00000071458 858 ntBASIC31.72■■■□□ 2.67
BC005561E9Q5E2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BC005561E9Q5E2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
BC005561E9Q5E2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
BC005561E9Q5E2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
BC005561E9Q5E2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
BC005561E9Q5E2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
BC005561E9Q5E2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC31.7■■■□□ 2.67
BC005561E9Q5E2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
BC005561E9Q5E2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.7■■■□□ 2.66
BC005561E9Q5E2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
BC005561E9Q5E2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
BC005561E9Q5E2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC31.68■■■□□ 2.66
BC005561E9Q5E2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC31.68■■■□□ 2.66
BC005561E9Q5E2 Gm42555-201ENSMUST00000199304 1039 ntBASIC31.68■■■□□ 2.66
BC005561E9Q5E2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC31.68■■■□□ 2.66
BC005561E9Q5E2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
BC005561E9Q5E2 Gm12527-201ENSMUST00000117967 564 ntBASIC31.65■■■□□ 2.66
BC005561E9Q5E2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
BC005561E9Q5E2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
BC005561E9Q5E2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
BC005561E9Q5E2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
BC005561E9Q5E2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
BC005561E9Q5E2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
BC005561E9Q5E2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
BC005561E9Q5E2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.65
BC005561E9Q5E2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC31.64■■■□□ 2.65
BC005561E9Q5E2 Il17rd-202ENSMUST00000223942 2186 ntBASIC31.63■■■□□ 2.65
BC005561E9Q5E2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms