Protein–RNA interactions for Protein: E9PV82

Fam53a, Protein FAM53A, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53aE9PV82 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam53aE9PV82 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.18■□□□□ 0.5
Fam53aE9PV82 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.18■□□□□ 0.5
Fam53aE9PV82 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam53aE9PV82 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam53aE9PV82 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam53aE9PV82 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.17■□□□□ 0.5
Fam53aE9PV82 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam53aE9PV82 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam53aE9PV82 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.15■□□□□ 0.5
Fam53aE9PV82 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Gm43137-201ENSMUST00000198052 594 ntBASIC18.15■□□□□ 0.5
Fam53aE9PV82 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam53aE9PV82 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Fam53aE9PV82 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Fam53aE9PV82 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Gm45417-201ENSMUST00000209533 758 ntBASIC18.14■□□□□ 0.49
Fam53aE9PV82 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam53aE9PV82 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam53aE9PV82 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.13■□□□□ 0.49
Fam53aE9PV82 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.13■□□□□ 0.49
Fam53aE9PV82 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Fam53aE9PV82 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam53aE9PV82 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Fam53aE9PV82 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam53aE9PV82 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.1■□□□□ 0.49
Fam53aE9PV82 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam53aE9PV82 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam53aE9PV82 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms