Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Slc4a9E9PUP3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc4a9E9PUP3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc4a9E9PUP3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Slc4a9E9PUP3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc4a9E9PUP3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Gm27801-201ENSMUST00000184174 223 ntBASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a9E9PUP3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Slc4a9E9PUP3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Slc4a9E9PUP3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a9E9PUP3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.78■■□□□ 1.4
Slc4a9E9PUP3 Gm13168-201ENSMUST00000121771 632 ntBASIC23.78■■□□□ 1.4
Slc4a9E9PUP3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a9E9PUP3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Slc4a9E9PUP3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a9E9PUP3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a9E9PUP3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc4a9E9PUP3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a9E9PUP3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a9E9PUP3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a9E9PUP3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Slc4a9E9PUP3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a9E9PUP3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a9E9PUP3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Slc4a9E9PUP3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a9E9PUP3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a9E9PUP3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a9E9PUP3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a9E9PUP3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Gm10812-201ENSMUST00000099864 546 ntBASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a9E9PUP3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Mir6982-201ENSMUST00000184354 68 ntBASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc4a9E9PUP3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc4a9E9PUP3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc4a9E9PUP3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc4a9E9PUP3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Slc4a9E9PUP3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc4a9E9PUP3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Slc4a9E9PUP3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc4a9E9PUP3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.68■■□□□ 1.38
Slc4a9E9PUP3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc4a9E9PUP3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms