Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28043E0CXC2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28043E0CXC2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Gm28043E0CXC2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28043E0CXC2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Golph3-202ENSMUST00000226517 2359 ntBASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28043E0CXC2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28043E0CXC2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28043E0CXC2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28043E0CXC2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28043E0CXC2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Gm28043E0CXC2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28043E0CXC2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Gm28043E0CXC2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28043E0CXC2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28043E0CXC2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28043E0CXC2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm28043E0CXC2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28043E0CXC2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.08■□□□□ 0.81
Gm28043E0CXC2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.08■□□□□ 0.81
Gm28043E0CXC2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28043E0CXC2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.08■□□□□ 0.8
Gm28043E0CXC2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28043E0CXC2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28043E0CXC2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28043E0CXC2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Gm28043E0CXC2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28043E0CXC2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28043E0CXC2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28043E0CXC2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28043E0CXC2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.04■□□□□ 0.8
Gm28043E0CXC2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28043E0CXC2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.04■□□□□ 0.8
Gm28043E0CXC2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28043E0CXC2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm28043E0CXC2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms