Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chd6A3KFM7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chd6A3KFM7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.81■□□□□ 0.28
Chd6A3KFM7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chd6A3KFM7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.8■□□□□ 0.28
Chd6A3KFM7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Gm5408-201ENSMUST00000197998 747 ntBASIC16.79■□□□□ 0.28
Chd6A3KFM7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd6A3KFM7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd6A3KFM7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.78■□□□□ 0.28
Chd6A3KFM7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd6A3KFM7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd6A3KFM7 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.77■□□□□ 0.28
Chd6A3KFM7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chd6A3KFM7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd6A3KFM7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Gm11421-201ENSMUST00000122124 294 ntBASIC16.76■□□□□ 0.27
Chd6A3KFM7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd6A3KFM7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd6A3KFM7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd6A3KFM7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd6A3KFM7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.75■□□□□ 0.27
Chd6A3KFM7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chd6A3KFM7 Gm6576-201ENSMUST00000169678 883 ntBASIC16.75■□□□□ 0.27
Chd6A3KFM7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chd6A3KFM7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd6A3KFM7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd6A3KFM7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chd6A3KFM7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd6A3KFM7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chd6A3KFM7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.73■□□□□ 0.27
Chd6A3KFM7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Chd6A3KFM7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd6A3KFM7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chd6A3KFM7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd6A3KFM7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.72■□□□□ 0.27
Chd6A3KFM7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd6A3KFM7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd6A3KFM7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms