Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm10033-202ENSMUST00000211874 928 ntBASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.19■■□□□ 1.14
Slc6a21A0A1B0GSD2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc6a21A0A1B0GSD2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 AV356131-201ENSMUST00000206201 750 ntBASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.17■■□□□ 1.14
Slc6a21A0A1B0GSD2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm42778-201ENSMUST00000199644 553 ntBASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Slc6a21A0A1B0GSD2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.15■■□□□ 1.14
Slc6a21A0A1B0GSD2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc6a21A0A1B0GSD2 Gm11421-201ENSMUST00000122124 294 ntBASIC22.15■■□□□ 1.14
Slc6a21A0A1B0GSD2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc6a21A0A1B0GSD2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc6a21A0A1B0GSD2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc6a21A0A1B0GSD2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Slc6a21A0A1B0GSD2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Slc6a21A0A1B0GSD2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Slc6a21A0A1B0GSD2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Slc6a21A0A1B0GSD2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc6a21A0A1B0GSD2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc6a21A0A1B0GSD2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.12■■□□□ 1.13
Slc6a21A0A1B0GSD2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.12■■□□□ 1.13
Slc6a21A0A1B0GSD2 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.12■■□□□ 1.13
Slc6a21A0A1B0GSD2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc6a21A0A1B0GSD2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Slc6a21A0A1B0GSD2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc6a21A0A1B0GSD2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.08■■□□□ 1.13
Slc6a21A0A1B0GSD2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc6a21A0A1B0GSD2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc6a21A0A1B0GSD2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc6a21A0A1B0GSD2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
Slc6a21A0A1B0GSD2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc6a21A0A1B0GSD2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms