Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv1-88A0A140T8N1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv1-88A0A140T8N1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv1-88A0A140T8N1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv1-88A0A140T8N1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv1-88A0A140T8N1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv1-88A0A140T8N1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv1-88A0A140T8N1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Igkv1-88A0A140T8N1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv1-88A0A140T8N1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Igkv1-88A0A140T8N1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv1-88A0A140T8N1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms