Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC43.63■■■■■ 4.58
Gm35339A0A140LHH9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC43.63■■■■■ 4.58
Gm35339A0A140LHH9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC43.63■■■■■ 4.58
Gm35339A0A140LHH9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC43.63■■■■■ 4.58
Gm35339A0A140LHH9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC43.63■■■■■ 4.57
Gm35339A0A140LHH9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC43.62■■■■■ 4.57
Gm35339A0A140LHH9 Gm4968-201ENSMUST00000071458 858 ntBASIC43.62■■■■■ 4.57
Gm35339A0A140LHH9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC43.62■■■■■ 4.57
Gm35339A0A140LHH9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC43.62■■■■■ 4.57
Gm35339A0A140LHH9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC43.62■■■■■ 4.57
Gm35339A0A140LHH9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC43.62■■■■■ 4.57
Gm35339A0A140LHH9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC43.61■■■■■ 4.57
Gm35339A0A140LHH9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC43.6■■■■■ 4.57
Gm35339A0A140LHH9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC43.6■■■■■ 4.57
Gm35339A0A140LHH9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC43.6■■■■■ 4.57
Gm35339A0A140LHH9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC43.6■■■■■ 4.57
Gm35339A0A140LHH9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC43.59■■■■■ 4.57
Gm35339A0A140LHH9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC43.58■■■■■ 4.57
Gm35339A0A140LHH9 Gm42555-201ENSMUST00000199304 1039 ntBASIC43.58■■■■■ 4.57
Gm35339A0A140LHH9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC43.57■■■■■ 4.57
Gm35339A0A140LHH9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC43.57■■■■■ 4.57
Gm35339A0A140LHH9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC43.57■■■■■ 4.57
Gm35339A0A140LHH9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC43.57■■■■■ 4.57
Gm35339A0A140LHH9 Gm13148-201ENSMUST00000118892 745 ntBASIC43.56■■■■■ 4.56
Gm35339A0A140LHH9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC43.56■■■■■ 4.56
Gm35339A0A140LHH9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC43.56■■■■■ 4.56
Gm35339A0A140LHH9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC43.56■■■■■ 4.56
Gm35339A0A140LHH9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC43.56■■■■■ 4.56
Gm35339A0A140LHH9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Gm35339A0A140LHH9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC43.54■■■■■ 4.56
Gm35339A0A140LHH9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC43.53■■■■■ 4.56
Gm35339A0A140LHH9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC43.53■■■■■ 4.56
Gm35339A0A140LHH9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC43.53■■■■■ 4.56
Gm35339A0A140LHH9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC43.53■■■■■ 4.56
Gm35339A0A140LHH9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC43.52■■■■■ 4.56
Gm35339A0A140LHH9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC43.52■■■■■ 4.56
Gm35339A0A140LHH9 Gm44949-201ENSMUST00000206423 1450 ntBASIC43.52■■■■■ 4.56
Gm35339A0A140LHH9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC43.52■■■■■ 4.56
Gm35339A0A140LHH9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC43.52■■■■■ 4.56
Gm35339A0A140LHH9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC43.52■■■■■ 4.56
Gm35339A0A140LHH9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC43.51■■■■■ 4.56
Gm35339A0A140LHH9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC43.51■■■■■ 4.56
Gm35339A0A140LHH9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC43.51■■■■■ 4.56
Gm35339A0A140LHH9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC43.51■■■■■ 4.56
Gm35339A0A140LHH9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC43.51■■■■■ 4.56
Gm35339A0A140LHH9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC43.51■■■■■ 4.56
Gm35339A0A140LHH9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC43.5■■■■■ 4.55
Gm35339A0A140LHH9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC43.5■■■■■ 4.55
Gm35339A0A140LHH9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC43.5■■■■■ 4.55
Gm35339A0A140LHH9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC43.49■■■■■ 4.55
Gm35339A0A140LHH9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC43.49■■■■■ 4.55
Gm35339A0A140LHH9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC43.49■■■■■ 4.55
Gm35339A0A140LHH9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC43.48■■■■■ 4.55
Gm35339A0A140LHH9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC43.48■■■■■ 4.55
Gm35339A0A140LHH9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC43.48■■■■■ 4.55
Gm35339A0A140LHH9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC43.48■■■■■ 4.55
Gm35339A0A140LHH9 Gm9988-201ENSMUST00000069786 435 ntBASIC43.48■■■■■ 4.55
Gm35339A0A140LHH9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC43.47■■■■■ 4.55
Gm35339A0A140LHH9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC43.47■■■■■ 4.55
Gm35339A0A140LHH9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC43.47■■■■■ 4.55
Gm35339A0A140LHH9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC43.47■■■■■ 4.55
Gm35339A0A140LHH9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC43.46■■■■■ 4.55
Gm35339A0A140LHH9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC43.46■■■■■ 4.55
Gm35339A0A140LHH9 Gm42418-201ENSMUST00000182010 1831 ntBASIC43.46■■■■■ 4.55
Gm35339A0A140LHH9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC43.45■■■■■ 4.55
Gm35339A0A140LHH9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC43.45■■■■■ 4.55
Gm35339A0A140LHH9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC43.45■■■■■ 4.55
Gm35339A0A140LHH9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC43.44■■■■■ 4.54
Gm35339A0A140LHH9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC43.44■■■■■ 4.54
Gm35339A0A140LHH9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC43.44■■■■■ 4.54
Gm35339A0A140LHH9 Gm43859-201ENSMUST00000200075 1412 ntBASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Gm12527-201ENSMUST00000117967 564 ntBASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC43.43■■■■■ 4.54
Gm35339A0A140LHH9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC43.42■■■■■ 4.54
Gm35339A0A140LHH9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC43.42■■■■■ 4.54
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms