Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav19A0A0B4J1K4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav19A0A0B4J1K4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav19A0A0B4J1K4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav19A0A0B4J1K4 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Golph3-202ENSMUST00000226517 2359 ntBASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Iqck-206ENSMUST00000208658 2891 ntBASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.05■□□□□ 0
Trav19A0A0B4J1K4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav19A0A0B4J1K4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav19A0A0B4J1K4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav19A0A0B4J1K4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav19A0A0B4J1K4 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.05■□□□□ -0
Trav19A0A0B4J1K4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav19A0A0B4J1K4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav19A0A0B4J1K4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav19A0A0B4J1K4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms