Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-4A0A0B4J1K2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav9-4A0A0B4J1K2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-4A0A0B4J1K2 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav9-4A0A0B4J1K2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-4A0A0B4J1K2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav9-4A0A0B4J1K2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9-4A0A0B4J1K2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms