Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav11A0A0B4J1J9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav11A0A0B4J1J9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav11A0A0B4J1J9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav11A0A0B4J1J9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Gm27502-201ENSMUST00000183495 199 ntBASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav11A0A0B4J1J9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms