Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gm9870-201ENSMUST00000063874 645 ntBASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gm22238-201ENSMUST00000175222 88 ntBASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.11■□□□□ 0.01
Ighv1-12A0A0A6YXJ9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms