Protein–RNA interactions for Protein: A0A0A6YWU3

Ighv6-7, Immunoglobulin heavy variable V6-7 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-7A0A0A6YWU3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv6-7A0A0A6YWU3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv6-7A0A0A6YWU3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ighv6-7A0A0A6YWU3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv6-7A0A0A6YWU3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ighv6-7A0A0A6YWU3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ighv6-7A0A0A6YWU3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ighv6-7A0A0A6YWU3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.05■□□□□ 0
Ighv6-7A0A0A6YWU3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ighv6-7A0A0A6YWU3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.04■□□□□ -0
Ighv6-7A0A0A6YWU3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv6-7A0A0A6YWU3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv6-7A0A0A6YWU3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv6-7A0A0A6YWU3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv6-7A0A0A6YWU3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms