Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-5A0A075B6B5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6-5A0A075B6B5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-5A0A075B6B5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-5A0A075B6B5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.66■□□□□ 0.1
Trav6-5A0A075B6B5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-5A0A075B6B5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-5A0A075B6B5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-5A0A075B6B5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-5A0A075B6B5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Gm7432-201ENSMUST00000210343 879 ntBASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6-5A0A075B6B5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Gm11599-201ENSMUST00000118720 878 ntBASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-5A0A075B6B5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-5A0A075B6B5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-5A0A075B6B5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-5A0A075B6B5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-5A0A075B6B5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-5A0A075B6B5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-5A0A075B6B5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav6-5A0A075B6B5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms