Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-4A0A075B6B4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-4A0A075B6B4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-4A0A075B6B4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-4A0A075B6B4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-4A0A075B6B4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-4A0A075B6B4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-4A0A075B6B4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav6-4A0A075B6B4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-4A0A075B6B4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-4A0A075B6B4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-4A0A075B6B4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-4A0A075B6B4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Gm12922-201ENSMUST00000120626 809 ntBASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav6-4A0A075B6B4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-4A0A075B6B4 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms