Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6n-6A0A075B6B2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Trav6n-6A0A075B6B2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-6A0A075B6B2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6n-6A0A075B6B2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-6A0A075B6B2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Gm45444-201ENSMUST00000211394 898 ntBASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-6A0A075B6B2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-6A0A075B6B2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-6A0A075B6B2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6n-6A0A075B6B2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Trav6n-6A0A075B6B2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-6A0A075B6B2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6n-6A0A075B6B2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.9□□□□□ -0.02
Trav6n-6A0A075B6B2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms