Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Gm9847-201ENSMUST00000052528 599 ntBASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6n-7A0A075B6A6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6n-7A0A075B6A6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Gm43530-201ENSMUST00000195920 274 ntBASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Golgb1-201ENSMUST00000023534 498 ntBASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav6n-7A0A075B6A6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6n-7A0A075B6A6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6n-7A0A075B6A6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.11■□□□□ 0.33
Trav6n-7A0A075B6A6 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6n-7A0A075B6A6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms