Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-3A0A075B645 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav14n-3A0A075B645 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-3A0A075B645 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-3A0A075B645 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Gm8503-201ENSMUST00000118131 455 ntBASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-3A0A075B645 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-3A0A075B645 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-3A0A075B645 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-3A0A075B645 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav14n-3A0A075B645 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav14n-3A0A075B645 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav14n-3A0A075B645 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav14n-3A0A075B645 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-3A0A075B645 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-3A0A075B645 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms