Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav1A0A075B5Z4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav1A0A075B5Z4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav1A0A075B5Z4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav1A0A075B5Z4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Trav1A0A075B5Z4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trav1A0A075B5Z4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav1A0A075B5Z4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav1A0A075B5Z4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav1A0A075B5Z4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav1A0A075B5Z4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav1A0A075B5Z4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms