Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm11993-201ENSMUST00000121861 820 ntBASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm14006-201ENSMUST00000122132 981 ntBASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Mir6387-201ENSMUST00000184042 108 ntBASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.07□□□□□ -0.32
Scn11aQ9R053 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.07□□□□□ -0.32
Scn11aQ9R053 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn11aQ9R053 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn11aQ9R053 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Mir291b-201ENSMUST00000104838 79 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Mir1249-201ENSMUST00000116791 98 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm11544-201ENSMUST00000120215 382 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm6038-201ENSMUST00000154310 948 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm5865-201ENSMUST00000198713 637 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Gm30055-201ENSMUST00000203175 803 ntBASIC13.06□□□□□ -0.32
Scn11aQ9R053 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn11aQ9R053 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm42851-201ENSMUST00000201325 1411 ntBASIC13.05□□□□□ -0.32
Scn11aQ9R053 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm23439-201ENSMUST00000104292 132 ntBASIC13.05□□□□□ -0.32
Scn11aQ9R053 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.05□□□□□ -0.32
Scn11aQ9R053 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm12009-201ENSMUST00000121361 1100 ntBASIC13.05□□□□□ -0.32
Scn11aQ9R053 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn11aQ9R053 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms