Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm14395-201ENSMUST00000120494 563 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm25492-201ENSMUST00000157383 129 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Mir6998-201ENSMUST00000183343 64 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm7430-201ENSMUST00000193824 1144 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm34023-201ENSMUST00000195539 217 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ssbp3Q9D032 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm8302-201ENSMUST00000119217 852 ntBASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm22442-201ENSMUST00000157256 144 ntBASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ssbp3Q9D032 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms