Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm15615-201ENSMUST00000118876 198 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm24074-201ENSMUST00000158178 260 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm19246-201ENSMUST00000173599 255 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm5302-201ENSMUST00000202130 796 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm11836-201ENSMUST00000121022 441 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm22144-201ENSMUST00000157402 102 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm23699-201ENSMUST00000158835 135 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm29067-201ENSMUST00000190821 470 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim11Q99PQ2 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm12419-201ENSMUST00000116649 636 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm12165-201ENSMUST00000117047 342 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms