Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.44□□□□□ -0.9
Smim3Q99PE5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gm9353-201ENSMUST00000200472 604 ntBASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gm2553-201ENSMUST00000215986 605 ntBASIC9.44□□□□□ -0.9
Smim3Q99PE5 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.44□□□□□ -0.9
Smim3Q99PE5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.44□□□□□ -0.9
Smim3Q99PE5 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm14644-201ENSMUST00000116671 647 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm11531-201ENSMUST00000117614 555 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm11660-201ENSMUST00000120955 412 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.43□□□□□ -0.9
Smim3Q99PE5 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smim3Q99PE5 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms