Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Snord17-201ENSMUST00000104526 238 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm24943-201ENSMUST00000158329 433 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm6518-201ENSMUST00000208450 342 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm12337-201ENSMUST00000119634 400 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm15982-201ENSMUST00000121681 554 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm14363-201ENSMUST00000122304 409 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm25288-201ENSMUST00000122800 265 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm43564-201ENSMUST00000196185 211 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm5708-201ENSMUST00000196289 886 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm44498-201ENSMUST00000199509 111 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm44605-201ENSMUST00000206892 949 ntBASIC11.84□□□□□ -0.51
Clp1Q99LI9 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clp1Q99LI9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Clp1Q99LI9 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.83□□□□□ -0.51
Clp1Q99LI9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Clp1Q99LI9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm13171-201ENSMUST00000117233 391 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms