Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx54Q8K4L0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm12435-201ENSMUST00000118949 1016 ntBASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm14148-201ENSMUST00000122433 1008 ntBASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm44540-201ENSMUST00000205640 354 ntBASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gm6859-201ENSMUST00000218614 989 ntBASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx54Q8K4L0 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 AA623943-201ENSMUST00000121794 354 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm16210-201ENSMUST00000122161 610 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm5311-201ENSMUST00000203518 709 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm44124-201ENSMUST00000204159 472 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 AC155300.1-201ENSMUST00000219134 480 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm5292-201ENSMUST00000073317 580 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx54Q8K4L0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Gm9353-201ENSMUST00000200472 604 ntBASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Gm44304-201ENSMUST00000200509 145 ntBASIC14.59□□□□□ -0.07
Ddx54Q8K4L0 Gm33080-201ENSMUST00000205429 172 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms