Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm45398-201ENSMUST00000210561 165 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm13422-201ENSMUST00000118834 504 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm8302-201ENSMUST00000119217 852 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm14395-201ENSMUST00000120494 563 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm11246-201ENSMUST00000120880 345 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm37905-201ENSMUST00000195310 341 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm45118-201ENSMUST00000208928 825 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.53□□□□□ -0.72
Clrn1Q8K445 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Clrn1Q8K445 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.53□□□□□ -0.72
Clrn1Q8K445 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Clrn1Q8K445 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm15528-201ENSMUST00000117821 864 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms