Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Slc49a3Q8CE47 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Snord17-201ENSMUST00000104526 238 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm15617-201ENSMUST00000118973 771 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm26956-201ENSMUST00000182176 986 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm37301-201ENSMUST00000195412 568 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm3961-201ENSMUST00000204425 994 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm10608-202ENSMUST00000213924 676 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm30285-201ENSMUST00000214614 422 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm19309-201ENSMUST00000218295 205 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm7046-201ENSMUST00000221351 977 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.21□□□□□ -0.77
Slc49a3Q8CE47 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc49a3Q8CE47 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm13786-201ENSMUST00000122371 333 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm3096-201ENSMUST00000185770 364 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm9257-201ENSMUST00000221254 232 ntBASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc49a3Q8CE47 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms