Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm8100-201ENSMUST00000182906 988 ntBASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm45113-201ENSMUST00000207518 165 ntBASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm5369-201ENSMUST00000217499 588 ntBASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gm10288-201ENSMUST00000084614 537 ntBASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm24891-201ENSMUST00000104391 136 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm11663-201ENSMUST00000117888 290 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm14724-201ENSMUST00000118400 537 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm11331-201ENSMUST00000119764 288 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm2965-201ENSMUST00000198365 343 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm4482-201ENSMUST00000200876 742 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Spcs1-203ENSMUST00000226374 592 ntBASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.86□□□□□ -0.51
Ccdc87Q8CDL9 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gm9062-201ENSMUST00000117712 727 ntBASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gm23085-201ENSMUST00000157849 293 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms