Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm16165-201ENSMUST00000160140 795 ntBASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.03□□□□□ -0.32
Usp44Q8C2S0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp44Q8C2S0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Usp44Q8C2S0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm12791-201ENSMUST00000120788 655 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm12176-201ENSMUST00000121420 875 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm19927-201ENSMUST00000185792 781 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm3508-201ENSMUST00000186012 792 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm8365-201ENSMUST00000197334 648 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm9102-201ENSMUST00000219250 465 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Usp44Q8C2S0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm13888-201ENSMUST00000119148 422 ntBASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm45594-201ENSMUST00000211717 241 ntBASIC13.01□□□□□ -0.33
Usp44Q8C2S0 AC154461.3-201ENSMUST00000224831 573 ntBASIC13.01□□□□□ -0.33
Usp44Q8C2S0 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.01□□□□□ -0.33
Usp44Q8C2S0 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms