Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm9133-201ENSMUST00000118289 540 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm16071-201ENSMUST00000119589 793 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm17826-201ENSMUST00000189720 798 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm9645-201ENSMUST00000197131 792 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm44980-201ENSMUST00000205826 314 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm9111-201ENSMUST00000219394 709 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm10020-201ENSMUST00000081993 612 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm4917-201ENSMUST00000121452 650 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm9211-201ENSMUST00000182882 975 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm37299-201ENSMUST00000193951 826 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Mt1-202ENSMUST00000211807 1085 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.49□□□□□ -0.57
Trub1Q8C0D0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms