Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm13423-201ENSMUST00000117205 888 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm13665-201ENSMUST00000120830 528 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm8810-201ENSMUST00000172895 754 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim35Q8C006 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm42818-201ENSMUST00000198869 987 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm5317-201ENSMUST00000204445 847 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim35Q8C006 AC099612.1-201ENSMUST00000226318 1636 ntBASIC12.91□□□□□ -0.34
Trim35Q8C006 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim35Q8C006 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm9839-201ENSMUST00000195252 1437 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm12636-201ENSMUST00000117395 624 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm22331-201ENSMUST00000158066 136 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Snora78-201ENSMUST00000158630 128 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm37219-201ENSMUST00000192036 926 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm43007-201ENSMUST00000197618 291 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm43438-201ENSMUST00000198133 379 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm31230-201ENSMUST00000199725 785 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm43171-201ENSMUST00000199882 291 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm29799-201ENSMUST00000204061 487 ntBASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim35Q8C006 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim35Q8C006 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms