Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm11619-201ENSMUST00000117474 237 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm11952-201ENSMUST00000121172 821 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm14993-201ENSMUST00000121180 164 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm5700-201ENSMUST00000191483 989 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm9487-201ENSMUST00000216600 472 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm5529-201ENSMUST00000165691 891 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm7719-201ENSMUST00000182374 975 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm18035-201ENSMUST00000211962 589 ntBASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh3rf2Q8BZT2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms