Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm15711-201ENSMUST00000118889 535 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm25226-201ENSMUST00000158198 123 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm26361-201ENSMUST00000158868 186 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm5996-201ENSMUST00000211110 718 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm14724-201ENSMUST00000118400 537 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm15329-201ENSMUST00000121408 155 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm18734-201ENSMUST00000172937 808 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm28746-201ENSMUST00000187453 380 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm43058-201ENSMUST00000197645 625 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm45433-201ENSMUST00000209386 247 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scaf4Q6PFF0 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms