Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm5865-201ENSMUST00000198713 637 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm9204-201ENSMUST00000212641 947 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm3791-201ENSMUST00000220790 768 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm6291-201ENSMUST00000179994 309 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm42710-201ENSMUST00000200608 985 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup98Q6PFD9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm8482-201ENSMUST00000117972 471 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm13841-201ENSMUST00000118829 483 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm11449-201ENSMUST00000119175 476 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm6686-201ENSMUST00000178455 258 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm8210-201ENSMUST00000178557 483 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm15454-201ENSMUST00000179718 483 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm37688-201ENSMUST00000195195 465 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm42689-201ENSMUST00000202403 404 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm6344-201ENSMUST00000075962 483 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm25125-201ENSMUST00000083340 136 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms