Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm5419-201ENSMUST00000119301 527 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm11700-201ENSMUST00000119409 403 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm12164-201ENSMUST00000121695 551 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm37424-201ENSMUST00000191727 561 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm43433-201ENSMUST00000196573 481 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm6013-201ENSMUST00000212264 699 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf220Q6PDX6 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms