Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Gm7765-201ENSMUST00000182585 974 ntBASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Gm43547-201ENSMUST00000197729 328 ntBASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Gm19178-201ENSMUST00000217524 1819 ntBASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Gm6768-201ENSMUST00000022467 1878 ntBASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Gm33707-201ENSMUST00000195135 569 ntBASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 AC164883.7-201ENSMUST00000228534 851 ntBASIC14.33□□□□□ -0.12
Chd4Q6PDQ2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gm5254-201ENSMUST00000188353 977 ntBASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gm42511-201ENSMUST00000196160 234 ntBASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 AC125409.3-201ENSMUST00000223488 653 ntBASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gm42521-201ENSMUST00000199190 2040 ntBASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd4Q6PDQ2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gm5976-201ENSMUST00000180794 996 ntBASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gm6644-201ENSMUST00000186507 951 ntBASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gm38233-201ENSMUST00000194259 807 ntBASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 AC154197.1-201ENSMUST00000225136 1382 ntBASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd4Q6PDQ2 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms