Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim28Q62318 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm14274-201ENSMUST00000117182 615 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm22344-201ENSMUST00000122642 278 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim28Q62318 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim28Q62318 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm23400-201ENSMUST00000174994 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm26463-201ENSMUST00000175065 101 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm24332-201ENSMUST00000175102 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25959-201ENSMUST00000175112 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm22475-201ENSMUST00000175169 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm22903-201ENSMUST00000175193 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25070-201ENSMUST00000175237 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm24159-201ENSMUST00000175264 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25299-201ENSMUST00000175283 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm23798-201ENSMUST00000175560 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm23802-201ENSMUST00000175565 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25708-201ENSMUST00000177687 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm24370-201ENSMUST00000178007 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm23049-201ENSMUST00000178068 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm28019-201ENSMUST00000178138 101 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25571-201ENSMUST00000178322 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25355-201ENSMUST00000178456 101 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm24975-201ENSMUST00000178492 101 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm23189-201ENSMUST00000178954 102 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm25100-201ENSMUST00000179750 101 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm23064-201ENSMUST00000179866 101 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm18801-201ENSMUST00000186616 536 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim28Q62318 Ighv5-8-202ENSMUST00000191967 337 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gm42751-201ENSMUST00000198065 559 ntBASIC14.41□□□□□ -0.1
Trim28Q62318 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trim28Q62318 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim28Q62318 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim28Q62318 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim28Q62318 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim28Q62318 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim28Q62318 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trim28Q62318 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim28Q62318 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim28Q62318 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Trim28Q62318 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Gm5764-201ENSMUST00000118817 885 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Gm15036-201ENSMUST00000118880 400 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gm27440-201ENSMUST00000184785 107 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim28Q62318 Gm5870-201ENSMUST00000196461 282 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Gm17889-201ENSMUST00000198410 598 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim28Q62318 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim28Q62318 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC14.4□□□□□ -0.1
Trim28Q62318 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim28Q62318 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms