Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Gm13445-201ENSMUST00000121664 307 ntBASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rc3h1Q4VGL6 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm25880-201ENSMUST00000104331 132 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm25562-201ENSMUST00000104608 133 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm12389-201ENSMUST00000117696 418 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm13351-201ENSMUST00000118087 414 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm12986-201ENSMUST00000119037 967 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm13022-201ENSMUST00000121181 285 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm4917-201ENSMUST00000121452 650 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm45610-201ENSMUST00000209227 784 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm35713-201ENSMUST00000210516 199 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm8255-201ENSMUST00000218693 305 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rc3h1Q4VGL6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Rc3h1Q4VGL6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms