Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
R3hdm4Q4VBF2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
R3hdm4Q4VBF2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Mir3547-201ENSMUST00000175461 88 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Mir6998-201ENSMUST00000183343 64 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm5100-201ENSMUST00000195631 589 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
R3hdm4Q4VBF2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm8876-201ENSMUST00000120768 1122 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm4879-201ENSMUST00000122190 1272 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm14665-201ENSMUST00000122294 557 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm4982-201ENSMUST00000160440 1098 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm26134-201ENSMUST00000178484 110 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm29410-201ENSMUST00000188383 694 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm43667-201ENSMUST00000198616 1095 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm9111-201ENSMUST00000219394 709 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12□□□□□ -0.49
R3hdm4Q4VBF2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12□□□□□ -0.49
R3hdm4Q4VBF2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
R3hdm4Q4VBF2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
R3hdm4Q4VBF2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
R3hdm4Q4VBF2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
R3hdm4Q4VBF2 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
R3hdm4Q4VBF2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
R3hdm4Q4VBF2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms