Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gm6038-201ENSMUST00000154310 948 ntBASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gm7815-201ENSMUST00000196104 832 ntBASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.48□□□□□ -0.09
Sf3b2Q3UJB0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gm13777-201ENSMUST00000118208 345 ntBASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Mir3091-201ENSMUST00000175086 76 ntBASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gm45745-201ENSMUST00000211447 1180 ntBASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Gm7061-201ENSMUST00000118127 1416 ntBASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b2Q3UJB0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gm14997-201ENSMUST00000119232 636 ntBASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gm14227-201ENSMUST00000119431 629 ntBASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gm14639-201ENSMUST00000120850 866 ntBASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 CT571271.1-201ENSMUST00000227071 670 ntBASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms